MEGA2018 Genomics Workshop: Population Genomics

June 3, 2018

Population genomics using low-coverage RAD data

 

Wet lab:

- preparation of 2bRAD libraries.

Dry lab: 

- read processing using HPC computer cluster (Linux/bash);

- population structure (PCA, ADMIXTURE, EEMS)

- demographic analysis based on allele frequency spectrum (Moments,    

stairwayPlot)

- genome scanning

 

Throughout the workshop we will use probabilistic genotyping with ANGSD, which is designed for low-coverage data.

MEGA2018 Genomics Workshop: Population Genomics

Register

Location

The Elizabeth Moore International Center for Coral Reef Research & Restoration

24244 Overseas Highway
Summerland Key, FL 33042