Population genomics using low-coverage RAD data
- preparation of 2bRAD libraries.
- read processing using HPC computer cluster (Linux/bash);
- population structure (PCA, ADMIXTURE, EEMS)
- demographic analysis based on allele frequency spectrum (Moments,
- genome scanning
Throughout the workshop we will use probabilistic genotyping with ANGSD, which is designed for low-coverage data.
24244 Overseas Highway
Summerland Key, FL 33042