Current Publications
Patton, P. T., Cheeseman, T., Abe, K., Yamaguchi, T., Reade, W., Southerland, K., Howard, A., Oleson, E. M., Allen, J. B., Ashe, E., Athayde, A., Baird, R. W., Basran, C., Cabrera, E., Calambokidis, J., Cardoso, J., Carrol, E. L., Cesario, A., Cheney, B. J., Corsi, E., Currie, J., Durban, J. W., Falcone, E. A., Fearnbach, H., Flynn, K., Franklin, T., Franklin, W., Galletti Vernazzani, B., Genov, T., Hill, M., Johnston, D. R., Keene, E. L., Mahaffy, S. D., McGuire, T. L., McPherson, L., Meyer, C., Michaud, R., Miliou, A., Orbach, D. N., Pearson, H. C., Rasmussen, M. H., Rayment, W. J., Rinaldi, C., Rinaldi, R., Siciliano, S., Stack, S., Tintore, B., Torres, L. G., Towers, J. R., Trotter, C., Tyson Moore, R., Weir, C. R., Wellard, R., Wells, R., Yano, K. M., Zaescmar, J. R., Bejder, L. (2023). A deep learning approach to photo-identification demonstrates high performance on two dozen cetacean species.
Methods in Ecology and Evolution,
00, 1-15.
https://doi.org/10.1111/2041-210X.14167 Stephanie M. Rosales, Lindsay K. Huebner, James S. Evans, Amy Apprill, Andrew C. Baker, Cynthia C. Becker, Anthony J. Bellantuono, Marilyn E. Brandt, Abigail S. Clark, Javier del Campo, Caroline E. Dennison , Katherine R. Eaton, Naomi E. Huntley, Christina A. Kellogg, Mónica Medina, Julie L. Meyer, Erinn M. Muller, Mauricio Rodriguez-Lanetty, Jennifer L. Salerno, William B. Schill, Erin N. Shilling, Julia Marie Stewart and Joshua D. Voss (2023). A meta-analysis of the stony coral tissue loss disease microbiome finds key bacteria in unaffected and lesion tissue in diseased colonies.
ISME Journal,
3, 19.
https://doi.org/10.1038/s43705-023-00220-0 Shikha Grover, Thao Pham, Anna Jones, Cristina Sinobas-Pereira, Marina Villoch Diaz Maurino, Evan C. Garrad, Nyasha J. Makoni, Antanisha Parks, Ryan J. Domalewski, Gabriel Riggio, Hannah An, Kunhua Chen, Michael R. Nichols (2023). A new class of monoclonal Aβ antibodies selectively target and trigger deposition of Aβ protofibrils.
Journal of Neurochemistry.
https://doi.org/10.1111/jnc.15817 Dr. Kenneth Hoadley, Grant Lockridge, Audrey McQuagge, K. Blue Pahl, Sean Lowry, Sophie Wong, Zachary Craig, Chelsea Petrik, Courtney Klepac, Erinn Muller (2023). A phenomic modeling approach for using chlorophyll-a fluorescence-based measurements on coral photosymbionts.
Frontiers in Marine Science,
10, 379.
https://doi.org/10.3389/fmars.2023.1092202 Lu, Haiyan; Toyoda, Jennifer H.; Wise, Sandra S.; Browning, Cynthia L.; Speer, Rachel M.; Croom-Perez, Tayler J.; Bolt, Alicia; Meaza, Idoia; Wise, Sr., John Pierce (2024). A whale of a tale: whale cells evade the driving mechanism for hexavalent chromium-induced chromosome instability.
Toxicological Sciences,
199(1), 49-62.
https://doi.org/10.1093/toxsci/kfae030 James V. Locascio, Christopher C. Koenig, Christopher R. Malinowski (2023). Absolute Abundance Estimates of Atlantic Goliath Grouper (Epinephelus itajara) on Spawning Aggregation Site.
Fishes,
8, 394-407.
https://doi.org/10.3390/fishes8080394 Patrick Kiel, Nathan Formel, Mike Jankulak, Andrew Baker, Ross Cunning, David Gilliam, Carly Kenkel, Chris Langdon, Diego Lirman, Caitlin Lustic, Kerry Maxwell, Alison Moudling, Amelia Moura, Erinn Muller, Stephanie Schopmeyer, Scott Winters, Ian Enochs (2023). Acropora cervicornis Data Coordination Hub, an open access database for evaluating genet performance.
Bulletin of marine science of the gulf and carribbean,
99(2), 119-136.
https://doi.org/10.5343/bms.2022.0064 Benjamin M. Binder, Guillaume Rieucau, James V. Locascio, J. Christopher Taylor, Kevin M. Boswell (2023). Active acoustic surveys reveal coastal fish community resistance to an environmental perturbation in South Florida.
PeerJ,
11(e14888), 1-22.
https://doi.org/10.7717/peerj.14888 Schwacke, L. H., Thomas, L., Wells, R. S., Rowles, T. K., Bossart, G. D., Townsend Jr, F., Mazzoil, M., Allen, J. B., Balmer, B. C., Barleycorn, A. A., Barratclough, A., Burt, L., De Guise, S., Fauquier, D., Gomez, F. M., Kellar, N. M., Schwacke, J. H., Speakman, T. R., Stolen, E. D., Quigley, B. M., Zolman, E. S., Smith, C. R. (2023). An expert-based system to predict population survival rate from health data.
Conservation biology, e14073.
https://doi.org/10.1111/cobi.14073 Benjamin Young, Olivia Williamson, Nicholas Kron, Natalia Andrade Rodriguez, Lys Isma, Nicholas MacKnight, Erinn Muller, Stephanie Rosales, Stephanie Sirotzke, Nikki Traylor-Knowles, Sara Williams, Michael Studivan (2024). Annotated genome and transcriptome of the endangered Caribbean mountainous star coral (Orbicella faveolata) using PacBio long-read sequencing.
BMC Genomics,
25(226), 226.
https://doi.org/10.1186/s12864-024-10092-w
Additional Publications
Boxman, S.E., Nystrom, M., Ergas, S.J., Main, K.L., Trotz, M.A. (2018). Evaluation of water treatment capacity, nutrient cycling, and biomass production in a marine aquaponic system. Ecol. Eng., 120, 299-310. doi:10.1016/j.ecoleng.2018.06.003
Main, K., Wetzel, D.L., Grams, R., Nystrom, M.J., Niebuhr, K., Lewis, J. 2018. Utilizing Recirculating Aquaculture Systems to Evaluate the Impact of Oil Toxicity on Marine Fishes: Design and Operation of a Large-Scale Experimental System. Marine Technology Society Journal. 52(6), 23-31. doi: https://doi.org/10.4031/MTSJ.52.6.2
Yanes-Roca, C., Rhody, N.R., Nystrom, M., Wittenrich, M.L., Main, K.L., 2012. Embryonic and Early Larval Development in Hatchery-Reared Common Snook. North American Journal of Aquaculture 74, 499-511.
Main, K.L., M. Resley, N. Rhody, N. Brennan, M. Nystrom, F. Jaenike. (2011). Developing Florida pompano hatchery technology for offshore aquaculture, land-based systems and stock enhancement in the Gulf of Mexico. Aquaculture America 2011, New Orleans, Louisiana.
Main, K.L., M. Resley, N. Rhody, M. Nystrom, T. Stevens and C. Adams. 2010. An overview of Florida Pompano research at Mote Aquaculture Research Park. Abstract – Aquaculture 2010, San Diego, California.
Nystrom, M., K.L. Main and T. Losordo. (2010) Development and evaluation of a zero-discharge fingerling production system to produce red drum Sciaenops ocellatus for stock enhancement. Abstract - Aquaculture 2010, San Diego, California.
Yanes-Roca, C., N. Rhody, M. Nystrom, K.L. Main. 2009. Effects of fatty acid composition and spawning season patterns on egg quality and larval survival in common snook (Centropomus undecimalis). Aquaculture 287 (3-4): 335-340.
Main, K.L., M. Nystrom, and T. Losordo. 2008. Performance evaluation of an intensive recirculating aquaculture system for production of juvenile red drum (Sciaenops ocellatus). Abstract - Aquaculture America 2008, Orlando, Florida.
Main, K.L., N. Rhody, M. Nystrom, M. Resley. 2007. Species Profile – Florida Pompano. Southern Regional Aquaculture Center (SRAC), No. 7206. September 6pp.
Main, K.L., M.J. Resley, M. Nystrom, J. Stubblefield and C.S. Lee 2007. Controlled maturation and spawning of common snook Centropomis undecimalis. Aquaculture 2007 Conference Proceedings, San Antonio, Texas.